Trident: Pythonic Scripting of Scientific Experiments

Trident is the Python scripting API for Aquarium , the software that runs the UW BIOFAB. The code respository is freely available to all. Trident was built by members of the Klavins lab.

API Reference

• Session (pydent.aqsession)
• Models (pydent.models)
• Planner (pydent.planner)
• Exceptions (pydent.exceptions)
• Serialization (pydent.marshaller)

User Documentation

The user documentation contains high-level information for users.

• Getting Started
• Installing Trident
• Inventory Management
• Experiment Planning
• Making Queries
• API Reference

Advanced Topics

• Advanced topics
  • Structured queries
  • Speeding up queries
  • Planner tutorial
  • Aquarium Query Language Schema

Developer Documentation

The developer documentation conatins information on how to contribute..

• Contributing
• pydent change log

References

• Trident's Github page

• Trident's PyPI repo

• Aquarium's Github page

• Aquarium DockerHub

• Klavin's Lab